Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MED25Q71SY5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
MED25Q71SY5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 HMGN1P19-201ENST00000436976 333 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 RHOQP3-201ENST00000437982 621 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 CEND1P1-201ENST00000451006 455 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 OR7E47P-204ENST00000575924 449 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.08■□□□□ 0.16
MED25Q71SY5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 AC010507.1-201ENST00000633895 436 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 BCAR1-209ENST00000546196 1340 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MED25Q71SY5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.08■□□□□ 0.16
MED25Q71SY5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.08■□□□□ 0.16
MED25Q71SY5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
MED25Q71SY5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MED25Q71SY5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CNN2P11-201ENST00000429351 262 ntBASIC16.07■□□□□ 0.16
MED25Q71SY5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.07■□□□□ 0.16
MED25Q71SY5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.07■□□□□ 0.16
MED25Q71SY5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
MED25Q71SY5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.07■□□□□ 0.16
MED25Q71SY5 KRT19P2-202ENST00000557173 1012 ntBASIC16.07■□□□□ 0.16
MED25Q71SY5 DUX4L17-201ENST00000557360 1267 ntBASIC16.07■□□□□ 0.16
MED25Q71SY5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 AC023141.13-201ENST00000604991 943 ntBASIC16.07■□□□□ 0.16
MED25Q71SY5 AL078644.1-201ENST00000609881 752 ntBASIC16.07■□□□□ 0.16
MED25Q71SY5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MED25Q71SY5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
MED25Q71SY5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MED25Q71SY5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.07■□□□□ 0.16
MED25Q71SY5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MED25Q71SY5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms