Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.29■■□□□ 1
SMIM5Q71RC9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM5Q71RC9 AL138781.2-201ENST00000617896 1843 ntBASIC21.29■■□□□ 1
SMIM5Q71RC9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.29■■□□□ 1
SMIM5Q71RC9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.28■■□□□ 1
SMIM5Q71RC9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SMIM5Q71RC9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 TOP3BP1-201ENST00000420768 1380 ntBASIC21.28■■□□□ 1
SMIM5Q71RC9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.28■■□□□ 1
SMIM5Q71RC9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 SPDYE18-201ENST00000510091 1050 ntBASIC21.28■■□□□ 1
SMIM5Q71RC9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.28■■□□□ 1
SMIM5Q71RC9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SMIM5Q71RC9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 AC131009.4-201ENST00000624048 1740 ntBASIC21.28■■□□□ 1
SMIM5Q71RC9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMIM5Q71RC9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.28■■□□□ 1
SMIM5Q71RC9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SMIM5Q71RC9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SMIM5Q71RC9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMIM5Q71RC9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.27■■□□□ 1
SMIM5Q71RC9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.27■■□□□ 1
SMIM5Q71RC9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.27■■□□□ 1
SMIM5Q71RC9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.27■■□□□ 1
SMIM5Q71RC9 MPDU1-223ENST00000582151 728 ntBASIC21.27■■□□□ 1
SMIM5Q71RC9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.27■■□□□ 1
SMIM5Q71RC9 AL606495.2-201ENST00000605867 535 ntBASIC21.27■■□□□ 1
SMIM5Q71RC9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM5Q71RC9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SMIM5Q71RC9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMIM5Q71RC9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.27■□□□□ 0.99
SMIM5Q71RC9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMIM5Q71RC9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
SMIM5Q71RC9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.27■□□□□ 0.99
SMIM5Q71RC9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.27■□□□□ 0.99
SMIM5Q71RC9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 LINC00895-201ENST00000629028 1637 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 SLC25A1P3-201ENST00000395415 828 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 RPS2P32-201ENST00000439199 892 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 AC104794.3-201ENST00000566840 1248 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 AC140912.1-201ENST00000577171 1054 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 MIR4259-201ENST00000584466 101 ntBASIC21.26■□□□□ 0.99
SMIM5Q71RC9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM5Q71RC9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 ACA64.2-201ENST00000459014 129 ntBASIC21.25■□□□□ 0.99
SMIM5Q71RC9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.25■□□□□ 0.99
SMIM5Q71RC9 AC105233.2-201ENST00000523697 349 ntBASIC21.25■□□□□ 0.99
SMIM5Q71RC9 AF228730.5-201ENST00000530288 346 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms