Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 TUBB7P-202ENST00000428444 1305 ntBASIC22.56■■□□□ 1.2
USP31Q70CQ4 TUBB8P7-204ENST00000567960 1332 ntBASIC22.56■■□□□ 1.2
USP31Q70CQ4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP31Q70CQ4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
USP31Q70CQ4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
USP31Q70CQ4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 FAM220BP-201ENST00000377689 816 ntBASIC22.55■■□□□ 1.2
USP31Q70CQ4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 AC005225.4-201ENST00000557330 545 ntBASIC22.55■■□□□ 1.2
USP31Q70CQ4 AC012645.4-201ENST00000610691 1061 ntBASIC22.55■■□□□ 1.2
USP31Q70CQ4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
USP31Q70CQ4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP31Q70CQ4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 BANF1P1-201ENST00000553684 263 ntBASIC22.54■■□□□ 1.2
USP31Q70CQ4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 AL138828.2-201ENST00000615812 383 ntBASIC22.54■■□□□ 1.2
USP31Q70CQ4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.54■■□□□ 1.2
USP31Q70CQ4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP31Q70CQ4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 HLA-H-201ENST00000383620 1096 ntBASIC22.53■■□□□ 1.2
USP31Q70CQ4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 CRB3P1-201ENST00000449338 276 ntBASIC22.53■■□□□ 1.2
USP31Q70CQ4 HLA-V-204ENST00000476601 1289 ntBASIC22.53■■□□□ 1.2
USP31Q70CQ4 SERBP1P5-201ENST00000510079 1181 ntBASIC22.53■■□□□ 1.2
USP31Q70CQ4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
USP31Q70CQ4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP31Q70CQ4 AC006277.1-201ENST00000624348 1610 ntBASIC22.53■■□□□ 1.2
USP31Q70CQ4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.52■■□□□ 1.2
USP31Q70CQ4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP31Q70CQ4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms