Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 MIR943-201ENST00000401286 94 ntBASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AC015922.1-201ENST00000421102 1152 ntBASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 KLF2P3-201ENST00000451977 1087 ntBASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 AP001059.3-201ENST00000619053 235 ntBASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AC107890.1-201ENST00000422478 521 ntBASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AC125807.1-201ENST00000483097 614 ntBASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AC243562.1-201ENST00000560672 389 ntBASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 AL009183.1-201ENST00000603760 355 ntBASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC149Q6ZUS6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 EGFEM1P-202ENST00000431685 1563 ntBASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 AC016396.2-201ENST00000562575 1417 ntBASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC149Q6ZUS6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 AC236430.1-201ENST00000402231 743 ntBASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 AC109635.5-201ENST00000533593 962 ntBASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 DUX4L17-201ENST00000557360 1267 ntBASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CCDC149Q6ZUS6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms