Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 AC012313.1-201ENST00000593393 3059 ntBASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PRSS29P-201ENST00000440800 595 ntBASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 AC108751.1-201ENST00000490852 363 ntBASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 SLC25A6P2-201ENST00000497974 877 ntBASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 AC060834.1-201ENST00000443027 2032 ntBASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R3AQ6IN85 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 AC002310.6-201ENST00000624451 1377 ntBASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 RPL13AP23-201ENST00000480739 586 ntBASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 OR7E47P-204ENST00000575924 449 ntBASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 Z83851.2-201ENST00000609564 659 ntBASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 AC004790.2-201ENST00000623588 572 ntBASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R3AQ6IN85 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 AC009053.2-201ENST00000563701 2365 ntBASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R3AQ6IN85 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 MRPL20P1-201ENST00000400819 433 ntBASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.33■□□□□ 0.68
PPP4R3AQ6IN85 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms