Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC39BQ5VTQ0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 AL118508.1-201ENST00000613502 2345 ntBASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TTC39BQ5VTQ0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC39BQ5VTQ0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 ZNF259P1-201ENST00000407656 1365 ntBASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 OR6D1P-203ENST00000641209 4860 ntBASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TTC39BQ5VTQ0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 RPL13AP23-201ENST00000480739 586 ntBASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 RPS15P9-201ENST00000494093 319 ntBASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 Z83851.2-201ENST00000609564 659 ntBASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC39BQ5VTQ0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms