Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 COX11P1-201ENST00000489116 835 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AL390719.2-201ENST00000606993 987 ntBASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
LINC00242Q5T6M2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 KRT8P10-201ENST00000450021 1447 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PAUPAR-201ENST00000630360 2965 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ALOX12P2-203ENST00000570921 1945 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 AL359075.1-203ENST00000462729 1002 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 AC105917.1-201ENST00000506637 2539 ntBASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC00242Q5T6M2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 HYMAI-201ENST00000635591 3347 ntBASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC00242Q5T6M2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms