Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ANKRD55Q3KP44 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 AL645728.1-201ENST00000366221 2101 ntBASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 MYCLP1-201ENST00000372451 1075 ntBASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 NEK4P2-201ENST00000580004 1012 ntBASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 FRMD8P1-201ENST00000440433 1524 ntBASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ANKRD55Q3KP44 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC092384.3-202ENST00000564646 2873 ntBASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC010460.3-201ENST00000511359 1579 ntBASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 MTHFR-217ENST00000641820 1569 ntBASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC113347.1-201ENST00000413321 391 ntBASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms