Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 GPR89P-201ENST00000407924 1495 ntBASIC16.81■□□□□ 0.28
CDKL1Q00532 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.81■□□□□ 0.28
CDKL1Q00532 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.81■□□□□ 0.28
CDKL1Q00532 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.81■□□□□ 0.28
CDKL1Q00532 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.81■□□□□ 0.28
CDKL1Q00532 AL121772.3-201ENST00000610840 674 ntBASIC16.81■□□□□ 0.28
CDKL1Q00532 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.81■□□□□ 0.28
CDKL1Q00532 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 AL513477.1-201ENST00000602865 2407 ntBASIC16.81■□□□□ 0.28
CDKL1Q00532 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDKL1Q00532 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL1Q00532 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CDKL1Q00532 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CDKL1Q00532 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
CDKL1Q00532 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDKL1Q00532 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL1Q00532 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDKL1Q00532 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.8■□□□□ 0.28
CDKL1Q00532 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDKL1Q00532 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL1Q00532 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL1Q00532 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 AC103702.1-201ENST00000548801 2630 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 AC092053.1-201ENST00000605787 1936 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDKL1Q00532 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.79■□□□□ 0.28
CDKL1Q00532 TSPY19P-201ENST00000418461 509 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 TSPY18P-201ENST00000441642 509 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.79■□□□□ 0.28
CDKL1Q00532 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 KRT18P31-201ENST00000506277 1292 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.79■□□□□ 0.28
CDKL1Q00532 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.79■□□□□ 0.28
CDKL1Q00532 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL1Q00532 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL1Q00532 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.79■□□□□ 0.28
CDKL1Q00532 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms