Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
AP3S2P59780 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.71□□□□□ -0.06
AP3S2P59780 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.71□□□□□ -0.06
AP3S2P59780 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S2P59780 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
AP3S2P59780 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
AP3S2P59780 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
AP3S2P59780 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S2P59780 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S2P59780 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S2P59780 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
AP3S2P59780 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.7□□□□□ -0.06
AP3S2P59780 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.7□□□□□ -0.06
AP3S2P59780 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S2P59780 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S2P59780 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP3S2P59780 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.7□□□□□ -0.06
AP3S2P59780 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S2P59780 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AC097376.2-205ENST00000610159 5334 ntBASIC14.69□□□□□ -0.06
AP3S2P59780 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 SBF1P1-201ENST00000444527 5631 ntBASIC14.69□□□□□ -0.06
AP3S2P59780 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP3S2P59780 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S2P59780 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S2P59780 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
AP3S2P59780 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.69□□□□□ -0.06
AP3S2P59780 RN7SL471P-201ENST00000580476 299 ntBASIC14.69□□□□□ -0.06
AP3S2P59780 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP3S2P59780 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 AL391256.1-201ENST00000443260 1855 ntBASIC14.69□□□□□ -0.06
AP3S2P59780 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S2P59780 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S2P59780 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S2P59780 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.68□□□□□ -0.06
AP3S2P59780 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S2P59780 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S2P59780 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S2P59780 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
AP3S2P59780 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
AP3S2P59780 CRYGFP-201ENST00000418459 633 ntBASIC14.68□□□□□ -0.06
AP3S2P59780 SLC25A1P2-201ENST00000430693 912 ntBASIC14.68□□□□□ -0.06
AP3S2P59780 PVRIG2P-201ENST00000435460 978 ntBASIC14.68□□□□□ -0.06
AP3S2P59780 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.68□□□□□ -0.06
AP3S2P59780 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.68□□□□□ -0.06
AP3S2P59780 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms