Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 FRMD8P1-201ENST00000440433 1524 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 FAM185BP-201ENST00000443595 716 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.3■□□□□ 0.04
CLDN15P56746 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN15P56746 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 AC107918.2-201ENST00000530817 355 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 DUX4L17-201ENST00000557360 1267 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 AC096734.2-201ENST00000562054 433 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN15P56746 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN15P56746 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 REXO1L3P-201ENST00000622202 1288 ntBASIC15.3■□□□□ 0.04
CLDN15P56746 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN15P56746 AC092053.1-201ENST00000605787 1936 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 LINC02012-201ENST00000608206 1725 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN15P56746 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CLDN15P56746 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN15P56746 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLDN15P56746 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 AC040169.1-201ENST00000565382 521 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN15P56746 ACTL9-202ENST00000612068 1252 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 AL513190.1-201ENST00000621254 727 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 AC108860.2-201ENST00000562760 2183 ntBASIC15.29■□□□□ 0.04
CLDN15P56746 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CLDN15P56746 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN15P56746 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 AC106820.2-201ENST00000563775 3264 ntBASIC15.28■□□□□ 0.04
CLDN15P56746 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN15P56746 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CLDN15P56746 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDN15P56746 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN15P56746 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN15P56746 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 CXCL1P1-201ENST00000502804 216 ntBASIC15.28■□□□□ 0.04
CLDN15P56746 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.28■□□□□ 0.04
CLDN15P56746 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN15P56746 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CLDN15P56746 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN15P56746 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN15P56746 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms