Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AL353593.2-201ENST00000602529 1483 ntBASIC14.85□□□□□ -0.03
ATP1B3P54709 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP1B3P54709 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP1B3P54709 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.85□□□□□ -0.03
ATP1B3P54709 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.85□□□□□ -0.03
ATP1B3P54709 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.85□□□□□ -0.03
ATP1B3P54709 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.85□□□□□ -0.03
ATP1B3P54709 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP1B3P54709 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATP1B3P54709 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.85□□□□□ -0.03
ATP1B3P54709 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.85□□□□□ -0.03
ATP1B3P54709 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATP1B3P54709 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP1B3P54709 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP1B3P54709 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATP1B3P54709 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP1B3P54709 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 AC003669.1-201ENST00000334569 611 ntBASIC14.84□□□□□ -0.03
ATP1B3P54709 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 KRT18P21-201ENST00000515767 1272 ntBASIC14.84□□□□□ -0.03
ATP1B3P54709 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.84□□□□□ -0.03
ATP1B3P54709 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
ATP1B3P54709 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 KRT18P1-202ENST00000452408 1331 ntBASIC14.84□□□□□ -0.03
ATP1B3P54709 AC005332.1-201ENST00000577698 1310 ntBASIC14.84□□□□□ -0.03
ATP1B3P54709 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ATP1B3P54709 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.84□□□□□ -0.03
ATP1B3P54709 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.84□□□□□ -0.03
ATP1B3P54709 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATP1B3P54709 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATP1B3P54709 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
ATP1B3P54709 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
ATP1B3P54709 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
ATP1B3P54709 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATP1B3P54709 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATP1B3P54709 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.83□□□□□ -0.03
ATP1B3P54709 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.83□□□□□ -0.03
ATP1B3P54709 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATP1B3P54709 HYMAI-201ENST00000635591 3347 ntBASIC14.83□□□□□ -0.04
ATP1B3P54709 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms