Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 HNRNPA1P40-201ENST00000426371 1278 ntBASIC24.08■■□□□ 1.45
CLTCL1P53675 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC24.08■■□□□ 1.45
CLTCL1P53675 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC24.08■■□□□ 1.45
CLTCL1P53675 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC24.08■■□□□ 1.45
CLTCL1P53675 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 COQ4-205ENST00000609948 956 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC24.08■■□□□ 1.45
CLTCL1P53675 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.44
CLTCL1P53675 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC24.08■■□□□ 1.44
CLTCL1P53675 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CLTCL1P53675 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC24.08■■□□□ 1.44
CLTCL1P53675 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CLTCL1P53675 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC24.07■■□□□ 1.44
CLTCL1P53675 COQ9-214ENST00000567933 882 ntTSL 3 BASIC24.07■■□□□ 1.44
CLTCL1P53675 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC24.07■■□□□ 1.44
CLTCL1P53675 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.07■■□□□ 1.44
CLTCL1P53675 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CLTCL1P53675 AL035252.4-201ENST00000624174 288 ntBASIC24.07■■□□□ 1.44
CLTCL1P53675 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC24.07■■□□□ 1.44
CLTCL1P53675 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC24.07■■□□□ 1.44
CLTCL1P53675 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC24.07■■□□□ 1.44
CLTCL1P53675 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLTCL1P53675 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC24.07■■□□□ 1.44
CLTCL1P53675 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 HLA-H-201ENST00000383620 1096 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 PP14571-201ENST00000404327 934 ntTSL 2 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.06■■□□□ 1.44
CLTCL1P53675 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC190387.1-201ENST00000551683 408 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 AC005225.4-201ENST00000557330 545 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AL844908.2-201ENST00000609461 460 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 AC018529.1-201ENST00000613063 361 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 AL590560.3-201ENST00000623350 461 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
CLTCL1P53675 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC068880.1-201ENST00000507289 2297 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CLTCL1P53675 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AC009477.1-201ENST00000452936 217 ntBASIC24.06■■□□□ 1.44
CLTCL1P53675 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.06■■□□□ 1.44
CLTCL1P53675 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC24.06■■□□□ 1.44
CLTCL1P53675 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLTCL1P53675 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC24.06■■□□□ 1.44
CLTCL1P53675 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.06■■□□□ 1.44
CLTCL1P53675 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.05■■□□□ 1.44
CLTCL1P53675 AC022144.1-201ENST00000602255 1580 ntBASIC24.05■■□□□ 1.44
CLTCL1P53675 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLTCL1P53675 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLTCL1P53675 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CLTCL1P53675 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLTCL1P53675 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CLTCL1P53675 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLTCL1P53675 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC24.05■■□□□ 1.44
CLTCL1P53675 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC24.05■■□□□ 1.44
CLTCL1P53675 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC24.04■■□□□ 1.44
CLTCL1P53675 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CLTCL1P53675 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.04■■□□□ 1.44
CLTCL1P53675 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC24.04■■□□□ 1.44
CLTCL1P53675 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 WDR53-204ENST00000433160 887 ntTSL 5 BASIC24.04■■□□□ 1.44
CLTCL1P53675 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLTCL1P53675 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.04■■□□□ 1.44
CLTCL1P53675 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms