Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC3P51654 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC3P51654 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC3P51654 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GPC3P51654 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC3P51654 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.77■□□□□ 0.6
GPC3P51654 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 AC091812.2-201ENST00000619081 385 ntBASIC18.77■□□□□ 0.6
GPC3P51654 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC3P51654 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.77■□□□□ 0.6
GPC3P51654 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GPC3P51654 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.77■□□□□ 0.6
GPC3P51654 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GPC3P51654 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GPC3P51654 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.77■□□□□ 0.59
GPC3P51654 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
GPC3P51654 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GPC3P51654 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 AC092919.2-201ENST00000623631 1645 ntBASIC18.76■□□□□ 0.59
GPC3P51654 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 AC254562.1-201ENST00000417586 456 ntBASIC18.76■□□□□ 0.59
GPC3P51654 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.76■□□□□ 0.59
GPC3P51654 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 REXO1L3P-201ENST00000622202 1288 ntBASIC18.76■□□□□ 0.59
GPC3P51654 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GPC3P51654 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GPC3P51654 FZD10-202ENST00000539839 3282 ntBASIC18.76■□□□□ 0.59
GPC3P51654 EGFEM1P-202ENST00000431685 1563 ntBASIC18.76■□□□□ 0.59
GPC3P51654 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GPC3P51654 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GPC3P51654 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GPC3P51654 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC3P51654 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC3P51654 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC3P51654 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC3P51654 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.75■□□□□ 0.59
GPC3P51654 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
GPC3P51654 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GPC3P51654 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.75■□□□□ 0.59
GPC3P51654 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GPC3P51654 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GPC3P51654 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms