Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK2P49760 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CLK2P49760 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLK2P49760 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLK2P49760 ALG1L5P-201ENST00000482043 771 ntBASIC19.2■□□□□ 0.66
CLK2P49760 AC112482.1-201ENST00000492080 688 ntBASIC19.2■□□□□ 0.66
CLK2P49760 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK2P49760 AC092865.5-201ENST00000545435 363 ntBASIC19.2■□□□□ 0.66
CLK2P49760 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK2P49760 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK2P49760 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CLK2P49760 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLK2P49760 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLK2P49760 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK2P49760 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLK2P49760 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.2■□□□□ 0.66
CLK2P49760 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK2P49760 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLK2P49760 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK2P49760 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CLK2P49760 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 UPF3AP3-201ENST00000420996 769 ntBASIC19.19■□□□□ 0.66
CLK2P49760 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.19■□□□□ 0.66
CLK2P49760 DNAJB3-201ENST00000446806 729 ntBASIC19.19■□□□□ 0.66
CLK2P49760 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.19■□□□□ 0.66
CLK2P49760 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.19■□□□□ 0.66
CLK2P49760 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.19■□□□□ 0.66
CLK2P49760 AC010327.4-202ENST00000591484 748 ntBASIC19.19■□□□□ 0.66
CLK2P49760 C20orf181-201ENST00000623918 480 ntBASIC19.19■□□□□ 0.66
CLK2P49760 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 AL391256.1-201ENST00000443260 1855 ntBASIC19.19■□□□□ 0.66
CLK2P49760 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CLK2P49760 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLK2P49760 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLK2P49760 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK2P49760 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLK2P49760 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CLK2P49760 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLK2P49760 RNU1-129P-201ENST00000384064 167 ntBASIC19.18■□□□□ 0.66
CLK2P49760 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.18■□□□□ 0.66
CLK2P49760 YBX1P5-201ENST00000509441 847 ntBASIC19.18■□□□□ 0.66
CLK2P49760 MIR3909-201ENST00000579518 119 ntBASIC19.18■□□□□ 0.66
CLK2P49760 U1.21-201ENST00000580816 167 ntBASIC19.18■□□□□ 0.66
CLK2P49760 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.18■□□□□ 0.66
CLK2P49760 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLK2P49760 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK2P49760 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK2P49760 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK2P49760 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 AL671710.1-201ENST00000610245 2349 ntBASIC19.17■□□□□ 0.66
CLK2P49760 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLK2P49760 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLK2P49760 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK2P49760 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms