Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 SLC22A20-204ENST00000530038 1673 ntBASIC19.36■□□□□ 0.69
HOXA13P31271 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXA13P31271 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HOXA13P31271 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA13P31271 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXA13P31271 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA13P31271 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXA13P31271 MIR4515-201ENST00000584082 81 ntBASIC19.35■□□□□ 0.69
HOXA13P31271 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA13P31271 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 AL023806.1-201ENST00000603994 1649 ntBASIC19.35■□□□□ 0.69
HOXA13P31271 AC092068.3-201ENST00000587894 2016 ntBASIC19.35■□□□□ 0.69
HOXA13P31271 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXA13P31271 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXA13P31271 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
HOXA13P31271 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXA13P31271 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 TOP3BP1-201ENST00000420768 1380 ntBASIC19.34■□□□□ 0.69
HOXA13P31271 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA13P31271 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA13P31271 HMGA1P7-201ENST00000406908 502 ntBASIC19.34■□□□□ 0.69
HOXA13P31271 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXA13P31271 AP006288.1-201ENST00000446065 395 ntBASIC19.34■□□□□ 0.69
HOXA13P31271 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA13P31271 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXA13P31271 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXA13P31271 AC005412.3-201ENST00000580309 715 ntBASIC19.34■□□□□ 0.69
HOXA13P31271 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA13P31271 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXA13P31271 AL645728.2-201ENST00000641974 660 ntBASIC19.34■□□□□ 0.69
HOXA13P31271 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXA13P31271 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXA13P31271 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA13P31271 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXA13P31271 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.33■□□□□ 0.69
HOXA13P31271 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXA13P31271 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA13P31271 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HOXA13P31271 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA13P31271 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA13P31271 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXA13P31271 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXA13P31271 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXA13P31271 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA13P31271 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA13P31271 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HOXA13P31271 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA13P31271 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXA13P31271 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA13P31271 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms