Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN6P29350 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPN6P29350 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN6P29350 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN6P29350 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN6P29350 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN6P29350 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PTPN6P29350 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 HLA-A-202ENST00000376806 1854 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN6P29350 PMPCAP1-201ENST00000508114 1576 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN6P29350 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 TPM4P1-201ENST00000436100 807 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN6P29350 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTPN6P29350 AL591684.3-201ENST00000605187 298 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 AC073592.5-201ENST00000624854 528 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN6P29350 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 INTS4P1-201ENST00000438455 1935 ntBASIC16.19■□□□□ 0.18
PTPN6P29350 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN6P29350 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN6P29350 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN6P29350 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN6P29350 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN6P29350 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN6P29350 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 AC026691.1-201ENST00000602502 2017 ntBASIC16.18■□□□□ 0.18
PTPN6P29350 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 AC004870.1-201ENST00000315132 882 ntBASIC16.18■□□□□ 0.18
PTPN6P29350 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN6P29350 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PTPN6P29350 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN6P29350 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.18■□□□□ 0.18
PTPN6P29350 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN6P29350 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.18■□□□□ 0.18
PTPN6P29350 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN6P29350 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN6P29350 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN6P29350 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
PTPN6P29350 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN6P29350 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN6P29350 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN6P29350 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms