Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 AC126763.1-201ENST00000552015 2118 ntBASIC21.97■■□□□ 1.11
RXRBP28702 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.97■■□□□ 1.11
RXRBP28702 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RXRBP28702 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 BCRP2-202ENST00000447763 634 ntBASIC21.97■■□□□ 1.11
RXRBP28702 UPF3AP2-201ENST00000457924 1132 ntBASIC21.97■■□□□ 1.11
RXRBP28702 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.97■■□□□ 1.11
RXRBP28702 AC098859.1-201ENST00000502915 1238 ntBASIC21.97■■□□□ 1.11
RXRBP28702 BCRP6-201ENST00000510112 632 ntBASIC21.97■■□□□ 1.11
RXRBP28702 BCRP7-201ENST00000511549 544 ntBASIC21.97■■□□□ 1.11
RXRBP28702 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.97■■□□□ 1.11
RXRBP28702 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.97■■□□□ 1.11
RXRBP28702 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.97■■□□□ 1.11
RXRBP28702 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.97■■□□□ 1.11
RXRBP28702 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RXRBP28702 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
RXRBP28702 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RXRBP28702 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.97■■□□□ 1.11
RXRBP28702 LINC00896-202ENST00000609602 2128 ntBASIC21.97■■□□□ 1.11
RXRBP28702 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RXRBP28702 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RXRBP28702 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC21.96■■□□□ 1.11
RXRBP28702 ACTG1P3-201ENST00000431775 1114 ntBASIC21.96■■□□□ 1.11
RXRBP28702 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RXRBP28702 ACTG1P17-201ENST00000558391 1119 ntBASIC21.96■■□□□ 1.11
RXRBP28702 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.96■■□□□ 1.11
RXRBP28702 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.96■■□□□ 1.11
RXRBP28702 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RXRBP28702 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.96■■□□□ 1.11
RXRBP28702 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.96■■□□□ 1.11
RXRBP28702 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RXRBP28702 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RXRBP28702 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.95■■□□□ 1.1
RXRBP28702 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 AC104457.1-201ENST00000401024 814 ntBASIC21.95■■□□□ 1.1
RXRBP28702 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.95■■□□□ 1.1
RXRBP28702 MIR5189-201ENST00000577370 114 ntBASIC21.95■■□□□ 1.1
RXRBP28702 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 MIR7845-201ENST00000618396 99 ntBASIC21.95■■□□□ 1.1
RXRBP28702 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.95■■□□□ 1.1
RXRBP28702 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.95■■□□□ 1.1
RXRBP28702 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RXRBP28702 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.95■■□□□ 1.1
RXRBP28702 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.94■■□□□ 1.1
RXRBP28702 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RXRBP28702 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms