Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 AD000864.1-201ENST00000624076 2295 ntBASIC17.02■□□□□ 0.32
HTR1BP28222 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.02■□□□□ 0.32
HTR1BP28222 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
HTR1BP28222 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HTR1BP28222 AC133963.1-201ENST00000504166 1679 ntBASIC17.02■□□□□ 0.32
HTR1BP28222 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
HTR1BP28222 UPF3AP3-201ENST00000420996 769 ntBASIC17.02■□□□□ 0.32
HTR1BP28222 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.02■□□□□ 0.32
HTR1BP28222 HCG4B-203ENST00000450128 991 ntBASIC17.02■□□□□ 0.32
HTR1BP28222 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.02■□□□□ 0.32
HTR1BP28222 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.02■□□□□ 0.32
HTR1BP28222 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.02■□□□□ 0.32
HTR1BP28222 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.02■□□□□ 0.32
HTR1BP28222 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTR1BP28222 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
HTR1BP28222 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HTR1BP28222 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTR1BP28222 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HTR1BP28222 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTR1BP28222 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HTR1BP28222 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTR1BP28222 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HTR1BP28222 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 AL355312.1-201ENST00000407115 2176 ntBASIC17.01■□□□□ 0.31
HTR1BP28222 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.01■□□□□ 0.31
HTR1BP28222 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
HTR1BP28222 LYSMD4-203ENST00000378904 2122 ntBASIC17.01■□□□□ 0.31
HTR1BP28222 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.01■□□□□ 0.31
HTR1BP28222 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.01■□□□□ 0.31
HTR1BP28222 AC010327.4-202ENST00000591484 748 ntBASIC17.01■□□□□ 0.31
HTR1BP28222 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.01■□□□□ 0.31
HTR1BP28222 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.01■□□□□ 0.31
HTR1BP28222 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.01■□□□□ 0.31
HTR1BP28222 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HTR1BP28222 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
HTR1BP28222 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTR1BP28222 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17■□□□□ 0.31
HTR1BP28222 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 GPX1P2-201ENST00000429271 606 ntBASIC17■□□□□ 0.31
HTR1BP28222 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17■□□□□ 0.31
HTR1BP28222 KRT18P2-201ENST00000447938 1258 ntBASIC17■□□□□ 0.31
HTR1BP28222 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HTR1BP28222 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17■□□□□ 0.31
HTR1BP28222 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17■□□□□ 0.31
HTR1BP28222 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17■□□□□ 0.31
HTR1BP28222 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17■□□□□ 0.31
HTR1BP28222 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1BP28222 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1BP28222 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HTR1BP28222 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HTR1BP28222 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1BP28222 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1BP28222 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HTR1BP28222 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HTR1BP28222 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1BP28222 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1BP28222 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms