Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCKDHBP21953 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BCKDHBP21953 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.73■□□□□ 0.27
BCKDHBP21953 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.73■□□□□ 0.27
BCKDHBP21953 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.73■□□□□ 0.27
BCKDHBP21953 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.73■□□□□ 0.27
BCKDHBP21953 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.73■□□□□ 0.27
BCKDHBP21953 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.73■□□□□ 0.27
BCKDHBP21953 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.73■□□□□ 0.27
BCKDHBP21953 AL008721.1-201ENST00000609964 604 ntBASIC16.73■□□□□ 0.27
BCKDHBP21953 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
BCKDHBP21953 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.73■□□□□ 0.27
BCKDHBP21953 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BCKDHBP21953 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.72■□□□□ 0.27
BCKDHBP21953 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.72■□□□□ 0.27
BCKDHBP21953 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BCKDHBP21953 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.72■□□□□ 0.27
BCKDHBP21953 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 AC091167.2-201ENST00000579581 588 ntBASIC16.72■□□□□ 0.27
BCKDHBP21953 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.72■□□□□ 0.27
BCKDHBP21953 SPDYE12P-201ENST00000618416 771 ntBASIC16.72■□□□□ 0.27
BCKDHBP21953 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
BCKDHBP21953 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
BCKDHBP21953 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
BCKDHBP21953 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BCKDHBP21953 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BCKDHBP21953 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BCKDHBP21953 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 PIN1P1-201ENST00000412108 996 ntBASIC16.71■□□□□ 0.27
BCKDHBP21953 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.71■□□□□ 0.27
BCKDHBP21953 RN7SL692P-201ENST00000464677 288 ntBASIC16.71■□□□□ 0.27
BCKDHBP21953 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 AL596325.1-201ENST00000563991 1082 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms