Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC079781.3-201ENST00000449110 356 ntBASIC17.23■□□□□ 0.35
HLA-DPA1P20036 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 TERC-201ENST00000602385 541 ntBASIC17.23■□□□□ 0.35
HLA-DPA1P20036 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 TUBB8P12-201ENST00000308911 1335 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 TUBB7P-202ENST00000428444 1305 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 TUBB8P7-204ENST00000567960 1332 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 KRT18P27-201ENST00000427733 1299 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 AL031008.1-201ENST00000619963 541 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 AL805961.1-202ENST00000641562 540 ntBASIC17.22■□□□□ 0.35
HLA-DPA1P20036 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DPA1P20036 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AC006504.4-201ENST00000592118 1568 ntBASIC17.21■□□□□ 0.35
HLA-DPA1P20036 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 RPS2P28-201ENST00000314255 741 ntBASIC17.21■□□□□ 0.35
HLA-DPA1P20036 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AC008735.5-201ENST00000623544 497 ntBASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AF228730.7-201ENST00000641842 219 ntBASIC17.21■□□□□ 0.35
HLA-DPA1P20036 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DPA1P20036 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
HLA-DPA1P20036 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 AC105020.1-201ENST00000435356 2205 ntBASIC17.2■□□□□ 0.34
HLA-DPA1P20036 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DPA1P20036 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms