Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 RNU1-129P-201ENST00000384064 167 ntBASIC19.07■□□□□ 0.64
CYP3A4P08684 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.07■□□□□ 0.64
CYP3A4P08684 AP002490.2-201ENST00000524791 560 ntBASIC19.07■□□□□ 0.64
CYP3A4P08684 AC109635.5-201ENST00000533593 962 ntBASIC19.07■□□□□ 0.64
CYP3A4P08684 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.07■□□□□ 0.64
CYP3A4P08684 U1.21-201ENST00000580816 167 ntBASIC19.07■□□□□ 0.64
CYP3A4P08684 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CYP3A4P08684 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CYP3A4P08684 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CYP3A4P08684 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CYP3A4P08684 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CYP3A4P08684 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CYP3A4P08684 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.06■□□□□ 0.64
CYP3A4P08684 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 AC002056.1-201ENST00000395613 760 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CYP3A4P08684 FAM58CP-201ENST00000435741 640 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 ACTG1P14-201ENST00000446382 1122 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.06■□□□□ 0.64
CYP3A4P08684 AL078644.1-201ENST00000609881 752 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 AC139530.3-201ENST00000620344 690 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CYP3A4P08684 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.06■□□□□ 0.64
CYP3A4P08684 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 BCL2-203ENST00000589955 5011 ntBASIC19.06■□□□□ 0.64
CYP3A4P08684 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYP3A4P08684 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 AL645728.1-201ENST00000366221 2101 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 AC092474.2-201ENST00000424288 719 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 AC112191.1-201ENST00000523689 701 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP3A4P08684 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CYP3A4P08684 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.05■□□□□ 0.64
CYP3A4P08684 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 AL009183.1-201ENST00000603760 355 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.05■□□□□ 0.64
CYP3A4P08684 AL139011.1-202ENST00000642063 584 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 SNX33P1-201ENST00000592116 1762 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 ELL2P1-201ENST00000413990 1906 ntBASIC19.05■□□□□ 0.64
CYP3A4P08684 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CYP3A4P08684 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CYP3A4P08684 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CYP3A4P08684 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CYP3A4P08684 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CYP3A4P08684 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.04■□□□□ 0.64
CYP3A4P08684 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CYP3A4P08684 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CYP3A4P08684 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CYP3A4P08684 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms