Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APOA4P06727 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.13■□□□□ 0.33
APOA4P06727 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.13■□□□□ 0.33
APOA4P06727 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.13■□□□□ 0.33
APOA4P06727 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
APOA4P06727 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APOA4P06727 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.13■□□□□ 0.33
APOA4P06727 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.13■□□□□ 0.33
APOA4P06727 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOA4P06727 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.12■□□□□ 0.33
APOA4P06727 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.12■□□□□ 0.33
APOA4P06727 SIGLEC30P-201ENST00000455569 941 ntBASIC17.12■□□□□ 0.33
APOA4P06727 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.12■□□□□ 0.33
APOA4P06727 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.12■□□□□ 0.33
APOA4P06727 AP001269.4-201ENST00000609611 512 ntBASIC17.12■□□□□ 0.33
APOA4P06727 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
APOA4P06727 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.12■□□□□ 0.33
APOA4P06727 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
APOA4P06727 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.12■□□□□ 0.33
APOA4P06727 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOA4P06727 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 SPDYE21P-201ENST00000413323 827 ntBASIC17.11■□□□□ 0.33
APOA4P06727 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 AC106795.1-205ENST00000512851 1056 ntBASIC17.11■□□□□ 0.33
APOA4P06727 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.11■□□□□ 0.33
APOA4P06727 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.11■□□□□ 0.33
APOA4P06727 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOA4P06727 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APOA4P06727 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms