Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
COL5A2P05997 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.12■■□□□ 1.13
COL5A2P05997 BICD1-207ENST00000551848 1962 ntBASIC22.11■■□□□ 1.13
COL5A2P05997 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.11■■□□□ 1.13
COL5A2P05997 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL5A2P05997 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC22.11■■□□□ 1.13
COL5A2P05997 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC22.11■■□□□ 1.13
COL5A2P05997 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 AC093004.1-201ENST00000508850 424 ntBASIC22.11■■□□□ 1.13
COL5A2P05997 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.11■■□□□ 1.13
COL5A2P05997 CHCHD2P3-201ENST00000603038 451 ntBASIC22.11■■□□□ 1.13
COL5A2P05997 MIR6805-201ENST00000615055 62 ntBASIC22.11■■□□□ 1.13
COL5A2P05997 SPTSSB-204ENST00000617024 1292 ntBASIC22.11■■□□□ 1.13
COL5A2P05997 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.11■■□□□ 1.13
COL5A2P05997 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.11■■□□□ 1.13
COL5A2P05997 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL5A2P05997 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.11■■□□□ 1.13
COL5A2P05997 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.11■■□□□ 1.13
COL5A2P05997 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL5A2P05997 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
COL5A2P05997 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.1■■□□□ 1.13
COL5A2P05997 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.1■■□□□ 1.13
COL5A2P05997 AL021920.2-201ENST00000624828 1351 ntBASIC22.1■■□□□ 1.13
COL5A2P05997 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL5A2P05997 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.1■■□□□ 1.13
COL5A2P05997 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.1■■□□□ 1.13
COL5A2P05997 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
COL5A2P05997 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC22.09■■□□□ 1.13
COL5A2P05997 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC22.09■■□□□ 1.13
COL5A2P05997 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC22.09■■□□□ 1.13
COL5A2P05997 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
COL5A2P05997 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.09■■□□□ 1.13
COL5A2P05997 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL5A2P05997 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
COL5A2P05997 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC22.09■■□□□ 1.13
COL5A2P05997 RN7SL752P-201ENST00000463779 287 ntBASIC22.09■■□□□ 1.13
COL5A2P05997 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
COL5A2P05997 RNA5SP410-201ENST00000516285 106 ntBASIC22.09■■□□□ 1.13
COL5A2P05997 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.09■■□□□ 1.13
COL5A2P05997 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.09■■□□□ 1.13
COL5A2P05997 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 AL606495.2-201ENST00000605867 535 ntBASIC22.09■■□□□ 1.13
COL5A2P05997 MIR6799-201ENST00000620297 69 ntBASIC22.09■■□□□ 1.13
COL5A2P05997 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC22.09■■□□□ 1.13
COL5A2P05997 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.08■■□□□ 1.13
COL5A2P05997 SLC7A15P-201ENST00000424028 1363 ntBASIC22.08■■□□□ 1.13
COL5A2P05997 AC116353.5-201ENST00000638148 1699 ntBASIC22.08■■□□□ 1.13
COL5A2P05997 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC22.08■■□□□ 1.13
COL5A2P05997 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.08■■□□□ 1.13
COL5A2P05997 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL5A2P05997 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL5A2P05997 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
COL5A2P05997 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL5A2P05997 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL5A2P05997 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL5A2P05997 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
COL5A2P05997 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.08■■□□□ 1.12
COL5A2P05997 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 SPDYE19P-201ENST00000338590 713 ntBASIC22.08■■□□□ 1.12
COL5A2P05997 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
COL5A2P05997 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC22.08■■□□□ 1.12
COL5A2P05997 RN7SL618P-201ENST00000477850 296 ntBASIC22.08■■□□□ 1.12
COL5A2P05997 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 AC119751.2-201ENST00000504529 210 ntBASIC22.08■■□□□ 1.12
COL5A2P05997 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.08■■□□□ 1.12
COL5A2P05997 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms