Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 UNC93B5-201ENST00000530315 699 ntBASIC14.33□□□□□ -0.12
SIX6O95475 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.33□□□□□ -0.12
SIX6O95475 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.33□□□□□ -0.12
SIX6O95475 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.33□□□□□ -0.12
SIX6O95475 AC010240.3-201ENST00000607688 395 ntBASIC14.33□□□□□ -0.12
SIX6O95475 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SIX6O95475 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SIX6O95475 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 AC096733.2-201ENST00000609937 1394 ntBASIC14.33□□□□□ -0.12
SIX6O95475 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 AC010491.1-201ENST00000563101 2797 ntBASIC14.33□□□□□ -0.12
SIX6O95475 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SIX6O95475 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX6O95475 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX6O95475 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 MTHFR-217ENST00000641820 1569 ntBASIC14.32□□□□□ -0.12
SIX6O95475 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.32□□□□□ -0.12
SIX6O95475 MESTP1-201ENST00000404287 994 ntBASIC14.32□□□□□ -0.12
SIX6O95475 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.32□□□□□ -0.12
SIX6O95475 AL138781.1-201ENST00000566567 1274 ntBASIC14.32□□□□□ -0.12
SIX6O95475 SLC25A1P4-201ENST00000567977 778 ntBASIC14.32□□□□□ -0.12
SIX6O95475 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SIX6O95475 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX6O95475 CR769767.2-201ENST00000622735 460 ntBASIC14.32□□□□□ -0.12
SIX6O95475 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX6O95475 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SIX6O95475 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX6O95475 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 AL009178.2-201ENST00000597278 2719 ntBASIC14.32□□□□□ -0.12
SIX6O95475 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX6O95475 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SIX6O95475 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX6O95475 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX6O95475 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
SIX6O95475 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.31□□□□□ -0.12
SIX6O95475 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX6O95475 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SIX6O95475 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms