Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLPXO76031 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPXO76031 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPXO76031 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPXO76031 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLPXO76031 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPXO76031 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.55■□□□□ 0.08
CLPXO76031 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLPXO76031 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.55■□□□□ 0.08
CLPXO76031 LINC01568-207ENST00000641790 1380 ntBASIC15.55■□□□□ 0.08
CLPXO76031 MIR1238-201ENST00000408483 83 ntBASIC15.55■□□□□ 0.08
CLPXO76031 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPXO76031 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 KRT18P35-201ENST00000510488 1269 ntBASIC15.55■□□□□ 0.08
CLPXO76031 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.55■□□□□ 0.08
CLPXO76031 FITM1-202ENST00000559294 800 ntBASIC15.55■□□□□ 0.08
CLPXO76031 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.55■□□□□ 0.08
CLPXO76031 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPXO76031 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPXO76031 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.55■□□□□ 0.08
CLPXO76031 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLPXO76031 AL024508.2-201ENST00000607749 1894 ntBASIC15.54■□□□□ 0.08
CLPXO76031 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 AC022532.1-201ENST00000624563 1728 ntBASIC15.54■□□□□ 0.08
CLPXO76031 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.54■□□□□ 0.08
CLPXO76031 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLPXO76031 KRT18P22-201ENST00000402024 1347 ntBASIC15.54■□□□□ 0.08
CLPXO76031 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 AC063926.3-201ENST00000624734 5658 ntBASIC15.54■□□□□ 0.08
CLPXO76031 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 AC005521.1-201ENST00000393351 872 ntBASIC15.54■□□□□ 0.08
CLPXO76031 AC113347.1-201ENST00000413321 391 ntBASIC15.54■□□□□ 0.08
CLPXO76031 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPXO76031 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPXO76031 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.54■□□□□ 0.08
CLPXO76031 NAPSB-206ENST00000562112 1266 ntBASIC15.54■□□□□ 0.08
CLPXO76031 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLPXO76031 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLPXO76031 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CLPXO76031 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPXO76031 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLPXO76031 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.53■□□□□ 0.08
CLPXO76031 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLPXO76031 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms