Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM3O75382 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM3O75382 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM3O75382 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 CICP6-201ENST00000457191 2729 ntBASIC15.96■□□□□ 0.15
TRIM3O75382 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 RPS2P28-201ENST00000314255 741 ntBASIC15.96■□□□□ 0.15
TRIM3O75382 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.96■□□□□ 0.15
TRIM3O75382 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIM3O75382 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 RPS2P1-201ENST00000434010 821 ntBASIC15.96■□□□□ 0.15
TRIM3O75382 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM3O75382 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM3O75382 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRIM3O75382 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM3O75382 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM3O75382 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TRIM3O75382 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
TRIM3O75382 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM3O75382 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 HLA-J-201ENST00000462773 1622 ntBASIC15.95■□□□□ 0.14
TRIM3O75382 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM3O75382 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM3O75382 AC079776.4-201ENST00000511039 504 ntBASIC15.95■□□□□ 0.14
TRIM3O75382 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM3O75382 OR7E14P-202ENST00000530490 1290 ntBASIC15.95■□□□□ 0.14
TRIM3O75382 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM3O75382 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM3O75382 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.95■□□□□ 0.14
TRIM3O75382 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRIM3O75382 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM3O75382 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM3O75382 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 AC148477.5-201ENST00000625164 1645 ntBASIC15.94■□□□□ 0.14
TRIM3O75382 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM3O75382 FLJ16779-201ENST00000612722 7638 ntBASIC15.94■□□□□ 0.14
TRIM3O75382 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms