Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT3O75175 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 AC022211.2-201ENST00000585075 2527 ntBASIC16.62■□□□□ 0.25
CNOT3O75175 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.62■□□□□ 0.25
CNOT3O75175 BX005266.1-201ENST00000473402 457 ntBASIC16.62■□□□□ 0.25
CNOT3O75175 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.62■□□□□ 0.25
CNOT3O75175 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.62■□□□□ 0.25
CNOT3O75175 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.62■□□□□ 0.25
CNOT3O75175 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT3O75175 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT3O75175 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT3O75175 AC004817.3-201ENST00000602957 2129 ntBASIC16.61■□□□□ 0.25
CNOT3O75175 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT3O75175 AL023806.1-201ENST00000603994 1649 ntBASIC16.61■□□□□ 0.25
CNOT3O75175 AC079776.2-201ENST00000641154 1609 ntBASIC16.61■□□□□ 0.25
CNOT3O75175 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 MIR574-201ENST00000385209 96 ntBASIC16.61■□□□□ 0.25
CNOT3O75175 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.61■□□□□ 0.25
CNOT3O75175 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT3O75175 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
CNOT3O75175 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.61■□□□□ 0.25
CNOT3O75175 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNOT3O75175 MTDHP4-201ENST00000600287 670 ntBASIC16.61■□□□□ 0.25
CNOT3O75175 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT3O75175 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT3O75175 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CNOT3O75175 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT3O75175 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CNOT3O75175 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT3O75175 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT3O75175 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT3O75175 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT3O75175 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT3O75175 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CNOT3O75175 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.6■□□□□ 0.25
CNOT3O75175 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms