Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.86□□□□□ -0.03
XRCC2O43543 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.86□□□□□ -0.03
XRCC2O43543 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XRCC2O43543 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.86□□□□□ -0.03
XRCC2O43543 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
XRCC2O43543 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
XRCC2O43543 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.85□□□□□ -0.03
XRCC2O43543 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 LINC00982-205ENST00000420957 435 ntBASIC14.85□□□□□ -0.03
XRCC2O43543 KRT18P31-201ENST00000506277 1292 ntBASIC14.85□□□□□ -0.03
XRCC2O43543 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.85□□□□□ -0.03
XRCC2O43543 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.85□□□□□ -0.03
XRCC2O43543 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.85□□□□□ -0.03
XRCC2O43543 AL732292.2-201ENST00000609649 430 ntBASIC14.85□□□□□ -0.03
XRCC2O43543 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 AL022326.1-202ENST00000641533 845 ntBASIC14.85□□□□□ -0.03
XRCC2O43543 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 FRMD8P1-201ENST00000440433 1524 ntBASIC14.85□□□□□ -0.03
XRCC2O43543 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.85□□□□□ -0.03
XRCC2O43543 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
XRCC2O43543 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
XRCC2O43543 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XRCC2O43543 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 NCF1C-201ENST00000438382 1427 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 AL356309.3-201ENST00000624132 1934 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
XRCC2O43543 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.84□□□□□ -0.03
XRCC2O43543 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.84□□□□□ -0.03
XRCC2O43543 AP002490.2-201ENST00000524791 560 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.84□□□□□ -0.03
XRCC2O43543 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.84□□□□□ -0.03
XRCC2O43543 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.84□□□□□ -0.03
XRCC2O43543 AC091304.2-201ENST00000564639 760 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
XRCC2O43543 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 TUBB8P12-201ENST00000308911 1335 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 TUBB7P-202ENST00000428444 1305 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 TUBB8P7-204ENST00000567960 1332 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
XRCC2O43543 AC004817.3-201ENST00000602957 2129 ntBASIC14.84□□□□□ -0.03
XRCC2O43543 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms