Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SRGAP3O43295 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.12■□□□□ 0.97
SRGAP3O43295 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.12■□□□□ 0.97
SRGAP3O43295 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.12■□□□□ 0.97
SRGAP3O43295 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP3O43295 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP3O43295 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP3O43295 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.12■□□□□ 0.97
SRGAP3O43295 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP3O43295 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SRGAP3O43295 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRGAP3O43295 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 TOP3BP1-201ENST00000420768 1380 ntBASIC21.11■□□□□ 0.97
SRGAP3O43295 AL021920.2-201ENST00000624828 1351 ntBASIC21.11■□□□□ 0.97
SRGAP3O43295 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP3O43295 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SRGAP3O43295 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 RHOQP3-201ENST00000437982 621 ntBASIC21.11■□□□□ 0.97
SRGAP3O43295 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.11■□□□□ 0.97
SRGAP3O43295 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.11■□□□□ 0.97
SRGAP3O43295 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRGAP3O43295 KRT8P49-201ENST00000604166 1432 ntBASIC21.11■□□□□ 0.97
SRGAP3O43295 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SRGAP3O43295 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP3O43295 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 PCDHB17P-201ENST00000539533 2393 ntBASIC21.1■□□□□ 0.97
SRGAP3O43295 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SRGAP3O43295 PMS2P7-201ENST00000506558 1336 ntBASIC21.1■□□□□ 0.97
SRGAP3O43295 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
SRGAP3O43295 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP3O43295 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.1■□□□□ 0.97
SRGAP3O43295 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SRGAP3O43295 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.1■□□□□ 0.97
SRGAP3O43295 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.1■□□□□ 0.97
SRGAP3O43295 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.1■□□□□ 0.97
SRGAP3O43295 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.1■□□□□ 0.97
SRGAP3O43295 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.1■□□□□ 0.97
SRGAP3O43295 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.1■□□□□ 0.97
SRGAP3O43295 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.1■□□□□ 0.97
SRGAP3O43295 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRGAP3O43295 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SRGAP3O43295 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.09■□□□□ 0.97
SRGAP3O43295 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.09■□□□□ 0.97
SRGAP3O43295 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP3O43295 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP3O43295 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.09■□□□□ 0.97
SRGAP3O43295 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRGAP3O43295 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.09■□□□□ 0.97
SRGAP3O43295 AC022211.2-201ENST00000585075 2527 ntBASIC21.09■□□□□ 0.97
SRGAP3O43295 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.09■□□□□ 0.97
SRGAP3O43295 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms