Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ABCC4O15439 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.59■■□□□ 1.05
ABCC4O15439 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCC4O15439 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.59■■□□□ 1.05
ABCC4O15439 PI4KAP1-204ENST00000612579 1703 ntBASIC21.59■■□□□ 1.05
ABCC4O15439 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ABCC4O15439 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ABCC4O15439 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 PCDHB17P-201ENST00000539533 2393 ntBASIC21.59■■□□□ 1.05
ABCC4O15439 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCC4O15439 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCC4O15439 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCC4O15439 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
ABCC4O15439 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCC4O15439 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCC4O15439 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.58■■□□□ 1.05
ABCC4O15439 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ABCC4O15439 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
ABCC4O15439 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.58■■□□□ 1.05
ABCC4O15439 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCC4O15439 AC078925.2-201ENST00000624013 1973 ntBASIC21.58■■□□□ 1.05
ABCC4O15439 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.58■■□□□ 1.05
ABCC4O15439 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ABCC4O15439 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCC4O15439 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.58■■□□□ 1.04
ABCC4O15439 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 AC009053.2-201ENST00000563701 2365 ntBASIC21.58■■□□□ 1.04
ABCC4O15439 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCC4O15439 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.58■■□□□ 1.04
ABCC4O15439 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
ABCC4O15439 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ABCC4O15439 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.57■■□□□ 1.04
ABCC4O15439 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCC4O15439 AP002472.1-201ENST00000577490 586 ntBASIC21.57■■□□□ 1.04
ABCC4O15439 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCC4O15439 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCC4O15439 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
ABCC4O15439 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
ABCC4O15439 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
ABCC4O15439 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 AC106886.4-201ENST00000623557 2502 ntBASIC21.57■■□□□ 1.04
ABCC4O15439 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 TUBB8P12-201ENST00000308911 1335 ntBASIC21.57■■□□□ 1.04
ABCC4O15439 TUBB7P-202ENST00000428444 1305 ntBASIC21.57■■□□□ 1.04
ABCC4O15439 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCC4O15439 TUBB8P7-204ENST00000567960 1332 ntBASIC21.57■■□□□ 1.04
ABCC4O15439 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCC4O15439 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ABCC4O15439 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.56■■□□□ 1.04
ABCC4O15439 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.56■■□□□ 1.04
ABCC4O15439 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.56■■□□□ 1.04
ABCC4O15439 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
ABCC4O15439 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.56■■□□□ 1.04
ABCC4O15439 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 GGTLC5P-201ENST00000617623 998 ntBASIC21.56■■□□□ 1.04
ABCC4O15439 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCC4O15439 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCC4O15439 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ABCC4O15439 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
ABCC4O15439 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
ABCC4O15439 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCC4O15439 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 KRT8P49-201ENST00000604166 1432 ntBASIC21.56■■□□□ 1.04
ABCC4O15439 AC025580.3-201ENST00000617932 1424 ntBASIC21.56■■□□□ 1.04
ABCC4O15439 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCC4O15439 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCC4O15439 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms