Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.32■□□□□ 0.84
FOXN1O15353 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 AL355306.1-201ENST00000415580 579 ntBASIC20.32■□□□□ 0.84
FOXN1O15353 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXN1O15353 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.32■□□□□ 0.84
FOXN1O15353 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.32■□□□□ 0.84
FOXN1O15353 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
FOXN1O15353 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXN1O15353 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXN1O15353 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
FOXN1O15353 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN1O15353 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 AC106820.2-201ENST00000563775 3264 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN1O15353 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN1O15353 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 AC008677.1-201ENST00000519230 1561 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 MRPS18AP1-201ENST00000414458 589 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXN1O15353 AC122714.2-201ENST00000502787 707 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXN1O15353 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.31■□□□□ 0.84
FOXN1O15353 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN1O15353 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 AC004233.3-201ENST00000607794 1269 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 AC009118.2-201ENST00000613275 655 ntBASIC20.31■□□□□ 0.84
FOXN1O15353 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN1O15353 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
FOXN1O15353 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN1O15353 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN1O15353 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 AL645608.8-201ENST00000606034 2086 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 PTCHD3P3-201ENST00000403073 906 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXN1O15353 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
FOXN1O15353 AL671277.1-201ENST00000429656 993 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXN1O15353 RBPMS2P1-201ENST00000437762 623 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 CXCL1P1-201ENST00000502804 216 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXN1O15353 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 GGTLC5P-201ENST00000617623 998 ntBASIC20.3■□□□□ 0.84
FOXN1O15353 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXN1O15353 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN1O15353 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN1O15353 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXN1O15353 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms