Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
UBFD1O14562 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.56■□□□□ 0.24
UBFD1O14562 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBFD1O14562 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 LINC00982-205ENST00000420957 435 ntBASIC16.55■□□□□ 0.24
UBFD1O14562 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 AP002490.2-201ENST00000524791 560 ntBASIC16.55■□□□□ 0.24
UBFD1O14562 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 AC092329.2-201ENST00000598402 547 ntBASIC16.55■□□□□ 0.24
UBFD1O14562 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UBFD1O14562 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
UBFD1O14562 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBFD1O14562 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
UBFD1O14562 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 POM121L3P-201ENST00000419331 1163 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.54■□□□□ 0.24
UBFD1O14562 ABCD1P5-201ENST00000445663 754 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 AP000867.3-201ENST00000524675 377 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 AC087388.1-201ENST00000571370 1112 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.54■□□□□ 0.24
UBFD1O14562 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 AL590326.2-201ENST00000625139 305 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.54■□□□□ 0.24
UBFD1O14562 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.54■□□□□ 0.24
UBFD1O14562 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBFD1O14562 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.54■□□□□ 0.24
UBFD1O14562 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
UBFD1O14562 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.53■□□□□ 0.24
UBFD1O14562 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 AC079776.2-201ENST00000641154 1609 ntBASIC16.53■□□□□ 0.24
UBFD1O14562 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBFD1O14562 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.53■□□□□ 0.24
UBFD1O14562 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
UBFD1O14562 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms