Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK2O00526 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
UPK2O00526 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 AC092171.3-201ENST00000610122 2651 ntBASIC13.7□□□□□ -0.22
UPK2O00526 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
UPK2O00526 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
UPK2O00526 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
UPK2O00526 ABCD1P5-201ENST00000445663 754 ntBASIC13.7□□□□□ -0.22
UPK2O00526 FAM210CP-201ENST00000445714 574 ntBASIC13.7□□□□□ -0.22
UPK2O00526 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.7□□□□□ -0.22
UPK2O00526 MIR3180-1-201ENST00000580374 94 ntBASIC13.7□□□□□ -0.22
UPK2O00526 MIR3180-3-201ENST00000584616 94 ntBASIC13.7□□□□□ -0.22
UPK2O00526 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
UPK2O00526 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK2O00526 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 AP000550.4-202ENST00000639755 178 ntBASIC13.7□□□□□ -0.22
UPK2O00526 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 SIGLEC16-201ENST00000599858 1437 ntBASIC13.7□□□□□ -0.22
UPK2O00526 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK2O00526 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK2O00526 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK2O00526 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.69□□□□□ -0.22
UPK2O00526 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UPK2O00526 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
UPK2O00526 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK2O00526 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 AC012615.1-201ENST00000565797 1299 ntBASIC13.69□□□□□ -0.22
UPK2O00526 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.69□□□□□ -0.22
UPK2O00526 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 MIR5100-201ENST00000579544 119 ntBASIC13.69□□□□□ -0.22
UPK2O00526 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.69□□□□□ -0.22
UPK2O00526 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 AL021920.2-201ENST00000624828 1351 ntBASIC13.69□□□□□ -0.22
UPK2O00526 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms