Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.07■□□□□ 0
NPIPB4C9JG80 RPS15P9-201ENST00000494093 319 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 MIR4492-201ENST00000581627 80 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 MPDU1-223ENST00000582151 728 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 AL121912.1-201ENST00000603683 238 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 AC008735.5-201ENST00000623544 497 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 PGM5P2-202ENST00000637225 1043 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
NPIPB4C9JG80 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.07■□□□□ 0
NPIPB4C9JG80 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB4C9JG80 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPIPB4C9JG80 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB4C9JG80 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.06■□□□□ 0
NPIPB4C9JG80 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB4C9JG80 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 AC008667.4-201ENST00000607370 168 ntBASIC15.06■□□□□ 0
NPIPB4C9JG80 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 PCDHA14-201ENST00000506751 2298 ntBASIC15.06■□□□□ 0
NPIPB4C9JG80 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.06■□□□□ 0
NPIPB4C9JG80 AC124067.4-201ENST00000519691 2379 ntBASIC15.06■□□□□ 0
NPIPB4C9JG80 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPB4C9JG80 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPIPB4C9JG80 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.05■□□□□ 0
NPIPB4C9JG80 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.05■□□□□ 0
NPIPB4C9JG80 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPB4C9JG80 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 KRT18P67-201ENST00000432816 1264 ntBASIC15.05■□□□□ -0
NPIPB4C9JG80 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 RNPS1P1-201ENST00000507437 918 ntBASIC15.05■□□□□ -0
NPIPB4C9JG80 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 UNC93B7-201ENST00000509439 705 ntBASIC15.05■□□□□ -0
NPIPB4C9JG80 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.05■□□□□ -0
NPIPB4C9JG80 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.05■□□□□ -0
NPIPB4C9JG80 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.05■□□□□ -0
NPIPB4C9JG80 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 AC129492.6-201ENST00000611383 1305 ntBASIC15.05■□□□□ -0
NPIPB4C9JG80 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.05■□□□□ -0
NPIPB4C9JG80 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.05■□□□□ -0
NPIPB4C9JG80 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.05■□□□□ -0
NPIPB4C9JG80 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPB4C9JG80 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPB4C9JG80 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms