Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TBC1D3FA6NER0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AC093525.9-201ENST00000624961 1746 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 RFPL4AP1-201ENST00000530883 850 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AC022145.2-201ENST00000598203 171 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 AC068880.1-201ENST00000507289 2297 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 EGFEM1P-202ENST00000431685 1563 ntBASIC16.94■□□□□ 0.3
TBC1D3FA6NER0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 AC012569.1-201ENST00000591191 1524 ntBASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 AC026120.1-201ENST00000611536 926 ntBASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 AL133373.2-201ENST00000623187 2828 ntBASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3FA6NER0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 SPDYE11-202ENST00000450699 704 ntBASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 CYMP-203ENST00000474680 1263 ntBASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 SPDYE9P-201ENST00000570642 692 ntBASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 SPDYE10P-202ENST00000612005 668 ntBASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 SPDYE8P-202ENST00000612377 668 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms