Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 SPCS2P4-201ENST00000436160 681 ntBASIC24.97■■□□□ 1.59
HFM1A2PYH4 TIMM8BP1-201ENST00000452384 211 ntBASIC24.97■■□□□ 1.59
HFM1A2PYH4 AC023141.5-201ENST00000458585 616 ntBASIC24.97■■□□□ 1.59
HFM1A2PYH4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC24.97■■□□□ 1.59
HFM1A2PYH4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 LBH-203ENST00000404397 543 ntTSL 4 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 AC105020.1-201ENST00000435356 2205 ntBASIC24.96■■□□□ 1.59
HFM1A2PYH4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 AC005915.1-201ENST00000624912 2018 ntBASIC24.96■■□□□ 1.59
HFM1A2PYH4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
HFM1A2PYH4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
HFM1A2PYH4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 AL139400.1-201ENST00000366220 510 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 SPDYE11-202ENST00000450699 704 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 LINC01225-203ENST00000563550 1244 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
HFM1A2PYH4 SPDYE9P-201ENST00000570642 692 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 SPDYE10P-202ENST00000612005 668 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 SPDYE8P-202ENST00000612377 668 ntBASIC24.95■■□□□ 1.59
HFM1A2PYH4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC24.95■■□□□ 1.59
HFM1A2PYH4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 AL391256.1-201ENST00000443260 1855 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 AC078925.2-201ENST00000624013 1973 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HFM1A2PYH4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms