Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 AC022211.2-201ENST00000585075 2527 ntBASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 NKILA-202ENST00000614771 2598 ntBASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCA3PQ9Y6N3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 HNRNPDP1-201ENST00000439535 754 ntBASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 FAM215A-202ENST00000632077 792 ntBASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 HLA-A-201ENST00000376802 1334 ntBASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCA3PQ9Y6N3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 ACTG1P4-201ENST00000425123 1122 ntBASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AC008735.5-201ENST00000623544 497 ntBASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AC016396.2-201ENST00000562575 1417 ntBASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCA3PQ9Y6N3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms