Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AC011498.5-201ENST00000592027 486 ntBASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AC046185.3-201ENST00000623228 1824 ntBASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.46■□□□□ 0.23
AP4B1Q9Y6B7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 AL024508.2-201ENST00000607749 1894 ntBASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 AL136379.1-201ENST00000623471 2642 ntBASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP4B1Q9Y6B7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.45■□□□□ 0.22
AP4B1Q9Y6B7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP4B1Q9Y6B7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms