Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AL596442.2-201ENST00000610240 980 ntBASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 AC116353.5-201ENST00000638148 1699 ntBASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB2Q9Y5E7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB2Q9Y5E7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB2Q9Y5E7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHB2Q9Y5E7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PCDHB2Q9Y5E7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 ACTL9-202ENST00000612068 1252 ntBASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB2Q9Y5E7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 ELL2P1-201ENST00000413990 1906 ntBASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB2Q9Y5E7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 CEND1P1-201ENST00000451006 455 ntBASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB2Q9Y5E7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB2Q9Y5E7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB2Q9Y5E7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB2Q9Y5E7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB2Q9Y5E7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB2Q9Y5E7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms