Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 AL627223.1-201ENST00000416693 442 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 AC023141.5-201ENST00000458585 616 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 CYMP-203ENST00000474680 1263 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 AC109635.5-201ENST00000533593 962 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 AC087641.1-201ENST00000557561 1021 ntBASIC19.18■□□□□ 0.66
COL20A1Q9P218 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.18■□□□□ 0.66
COL20A1Q9P218 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL20A1Q9P218 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 AC108860.2-201ENST00000562760 2183 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 SPDYE11-202ENST00000450699 704 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 HLA-J-203ENST00000494367 1087 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 AC124947.2-201ENST00000547118 1133 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 SPDYE9P-201ENST00000570642 692 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 AL031055.1-201ENST00000606362 631 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 SPDYE10P-202ENST00000612005 668 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 SPDYE8P-202ENST00000612377 668 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 FZD10-202ENST00000539839 3282 ntBASIC19.17■□□□□ 0.66
COL20A1Q9P218 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
COL20A1Q9P218 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL20A1Q9P218 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AL645939.2-201ENST00000427340 991 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 FAM58DP-201ENST00000428076 619 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 SPCS2P4-201ENST00000436160 681 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AC069335.1-201ENST00000489972 472 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 FAM86C2P-203ENST00000528684 1004 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 CYP2A7P1-201ENST00000595391 815 ntBASIC19.16■□□□□ 0.66
COL20A1Q9P218 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.16■□□□□ 0.66
COL20A1Q9P218 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL20A1Q9P218 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms