Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HACD3Q9P035 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.3■□□□□ 0.36
HACD3Q9P035 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HACD3Q9P035 AC021087.4-201ENST00000563761 564 ntBASIC17.3■□□□□ 0.36
HACD3Q9P035 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 AL353135.1-201ENST00000606729 504 ntBASIC17.3■□□□□ 0.36
HACD3Q9P035 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 GPR89P-201ENST00000407924 1495 ntBASIC17.3■□□□□ 0.36
HACD3Q9P035 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HACD3Q9P035 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HACD3Q9P035 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HACD3Q9P035 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.29■□□□□ 0.36
HACD3Q9P035 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.29■□□□□ 0.36
HACD3Q9P035 LAGE3P1-201ENST00000425356 484 ntBASIC17.29■□□□□ 0.36
HACD3Q9P035 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.29■□□□□ 0.36
HACD3Q9P035 AC124947.2-201ENST00000547118 1133 ntBASIC17.29■□□□□ 0.36
HACD3Q9P035 AL139424.1-201ENST00000607572 797 ntBASIC17.29■□□□□ 0.36
HACD3Q9P035 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HACD3Q9P035 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HACD3Q9P035 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HACD3Q9P035 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HACD3Q9P035 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HACD3Q9P035 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.28■□□□□ 0.36
HACD3Q9P035 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 AC064862.7-201ENST00000604520 867 ntBASIC17.28■□□□□ 0.36
HACD3Q9P035 AC025062.2-201ENST00000605477 670 ntBASIC17.28■□□□□ 0.36
HACD3Q9P035 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HACD3Q9P035 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.28■□□□□ 0.36
HACD3Q9P035 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HACD3Q9P035 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HACD3Q9P035 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms