Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 SPDYE14P-201ENST00000442619 822 ntBASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 AC027307.2-201ENST00000591252 911 ntBASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 AC008764.6-201ENST00000595909 2069 ntBASIC19.42■□□□□ 0.7
HOXC10Q9NYD6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AL390961.4-201ENST00000623958 2535 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 SLC25A1P3-201ENST00000395415 828 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AC125807.1-201ENST00000483097 614 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ALG1L8P-201ENST00000533887 760 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AP000842.3-202ENST00000569238 1080 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 KRT8P49-201ENST00000604166 1432 ntBASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXC10Q9NYD6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 AL138688.1-201ENST00000624851 1594 ntBASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 AC116353.5-201ENST00000638148 1699 ntBASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 AC138932.1-201ENST00000534164 6830 ntBASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 FRMD8P1-201ENST00000440433 1524 ntBASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC10Q9NYD6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC10Q9NYD6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC10Q9NYD6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms