Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
CCM2LQ9NUG4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 SPDYE13P-201ENST00000445314 798 ntBASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 AC009154.2-201ENST00000621177 724 ntBASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCM2LQ9NUG4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 TSSC2-201ENST00000450217 709 ntBASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms