Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 NUS1P1-201ENST00000446295 882 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 AC104819.1-201ENST00000504587 486 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 AP000867.3-201ENST00000524675 377 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 TUBB7P-202ENST00000428444 1305 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 TUBB8P7-204ENST00000567960 1332 ntBASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 SPDYE21P-201ENST00000413323 827 ntBASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 AC092329.2-201ENST00000598402 547 ntBASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 AP000550.4-202ENST00000639755 178 ntBASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.44■□□□□ 0.22
LRTM1Q9HBL6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 AP002490.2-201ENST00000524791 560 ntBASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 MIR3180-1-201ENST00000580374 94 ntBASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 MIR3180-3-201ENST00000584616 94 ntBASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms