Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 SLC25A6P2-201ENST00000497974 877 ntBASIC17.98■□□□□ 0.47
LHX5Q9H2C1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX5Q9H2C1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 LINC00895-201ENST00000629028 1637 ntBASIC17.97■□□□□ 0.47
LHX5Q9H2C1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 AC078925.2-201ENST00000624013 1973 ntBASIC17.97■□□□□ 0.47
LHX5Q9H2C1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX5Q9H2C1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 AC011676.5-201ENST00000624864 2660 ntBASIC17.96■□□□□ 0.47
LHX5Q9H2C1 AL645728.1-201ENST00000366221 2101 ntBASIC17.96■□□□□ 0.47
LHX5Q9H2C1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX5Q9H2C1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.96■□□□□ 0.46
LHX5Q9H2C1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
LHX5Q9H2C1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms