Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AL161645.1-201ENST00000622716 1255 ntBASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 AC090340.1-201ENST00000620778 4980 ntBASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBE2OQ9C0C9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 AC027369.6-201ENST00000525520 931 ntBASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 LINC01225-203ENST00000563550 1244 ntBASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBE2OQ9C0C9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AL096828.2-201ENST00000567259 1965 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AL390961.4-201ENST00000623958 2535 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AC099398.1-201ENST00000567919 2776 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 GIMAP3P-201ENST00000495150 836 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 AL132655.2-201ENST00000596276 594 ntBASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
UBE2OQ9C0C9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms