Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 KRT8P48-201ENST00000515599 1220 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC093520.2-201ENST00000561830 333 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SNHG9-202ENST00000564014 471 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC023141.13-201ENST00000604991 943 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AL645608.8-201ENST00000606034 2086 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SLC22A20-204ENST00000530038 1673 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ATP6V0CP3-201ENST00000417255 467 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 HNRNPA1P28-201ENST00000424481 961 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC060834.1-201ENST00000443027 2032 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AP006288.1-201ENST00000446065 395 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC109322.1-201ENST00000524499 1264 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms