Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NDUFAF3Q9BU61 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 FAM8A6P-201ENST00000407496 1135 ntBASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NDUFAF3Q9BU61 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 AC092171.3-201ENST00000610122 2651 ntBASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.27□□□□□ -0.28
NDUFAF3Q9BU61 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 AC091076.1-201ENST00000610741 619 ntBASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms