Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EYA3Q99504 AL390961.4-201ENST00000623958 2535 ntBASIC20.63■□□□□ 0.89
EYA3Q99504 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
EYA3Q99504 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EYA3Q99504 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
EYA3Q99504 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
EYA3Q99504 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.62■□□□□ 0.89
EYA3Q99504 AC063926.2-201ENST00000623766 1308 ntBASIC20.62■□□□□ 0.89
EYA3Q99504 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 AC133963.1-201ENST00000504166 1679 ntBASIC20.62■□□□□ 0.89
EYA3Q99504 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.62■□□□□ 0.89
EYA3Q99504 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.62■□□□□ 0.89
EYA3Q99504 AC005034.1-201ENST00000426657 489 ntBASIC20.62■□□□□ 0.89
EYA3Q99504 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.62■□□□□ 0.89
EYA3Q99504 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.62■□□□□ 0.89
EYA3Q99504 AL035252.4-201ENST00000624174 288 ntBASIC20.62■□□□□ 0.89
EYA3Q99504 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
EYA3Q99504 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EYA3Q99504 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.62■□□□□ 0.89
EYA3Q99504 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.62■□□□□ 0.89
EYA3Q99504 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.61■□□□□ 0.89
EYA3Q99504 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
EYA3Q99504 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
EYA3Q99504 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 MIR346-201ENST00000362234 95 ntBASIC20.61■□□□□ 0.89
EYA3Q99504 MIR661-201ENST00000384842 89 ntBASIC20.61■□□□□ 0.89
EYA3Q99504 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.61■□□□□ 0.89
EYA3Q99504 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.61■□□□□ 0.89
EYA3Q99504 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
EYA3Q99504 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.61■□□□□ 0.89
EYA3Q99504 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EYA3Q99504 LINC02560-201ENST00000596379 459 ntBASIC20.61■□□□□ 0.89
EYA3Q99504 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 AC008761.3-201ENST00000624803 892 ntBASIC20.61■□□□□ 0.89
EYA3Q99504 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
EYA3Q99504 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
EYA3Q99504 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EYA3Q99504 AC012317.2-201ENST00000623305 2251 ntBASIC20.61■□□□□ 0.89
EYA3Q99504 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
EYA3Q99504 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.6■□□□□ 0.89
EYA3Q99504 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.6■□□□□ 0.89
EYA3Q99504 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.6■□□□□ 0.89
EYA3Q99504 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
EYA3Q99504 SLC25A6P5-201ENST00000435663 894 ntBASIC20.6■□□□□ 0.89
EYA3Q99504 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.6■□□□□ 0.89
EYA3Q99504 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.6■□□□□ 0.89
EYA3Q99504 AC097493.3-201ENST00000509725 367 ntBASIC20.6■□□□□ 0.89
EYA3Q99504 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.6■□□□□ 0.89
EYA3Q99504 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.6■□□□□ 0.89
EYA3Q99504 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
EYA3Q99504 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EYA3Q99504 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.59■□□□□ 0.89
EYA3Q99504 EGFEM1P-202ENST00000431685 1563 ntBASIC20.59■□□□□ 0.89
EYA3Q99504 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
EYA3Q99504 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
EYA3Q99504 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.59■□□□□ 0.89
EYA3Q99504 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
EYA3Q99504 SLC22A20-204ENST00000530038 1673 ntBASIC20.59■□□□□ 0.89
EYA3Q99504 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.59■□□□□ 0.89
EYA3Q99504 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.59■□□□□ 0.89
EYA3Q99504 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EYA3Q99504 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.59■□□□□ 0.89
EYA3Q99504 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms